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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855395.1_cds_XP_016512832.1_25437
CDS Infomation

[gene=LOC107829876] [db_xref=GeneID:107829876] [protein=histidine--tRNA ligase, cytoplasmic-like] [partial=5'] [protein_id=XP_016512832.1] [location=join(<9..23,445..579,2171..2449,3022..3162,3709..4008)] [gbkey=CDS]
Sequence

ATTGGAGAGTATGAGGTAAAGCTTAATCACAGAAAGCTGCTTGATGGTATGTTAGCTATA
TGCGGGGTGCCACAAGAGAAATTCAGAACCATTTGTTCAAGCATTGACAAGCTGGATAAA
CAATCGTTTGAGCAGATAAAAAAAGAAATGGTGGATGAGAAAGGCTTAAGTGATGAGATA
TCAGACAGAATTGGTACATTTGTCAAATGGAGGGGACCTCCTGTGGAATTATTATCTAAG
CTTAAGCAGGAACGCAGTTTCTTGGAGAACAATGAATCCTCACTTGCATTGGATGAATTA
GACATCATGTTTAAAGCTCTTGAGAGGTCCAGGTGTATTGACAGAGTCGTTTTTGACTTG
AGCCTTGCAAGAGGTCTTGACTATTACACAGGAGTCATATTCGAAGCTGTCTTTAAAGGA
GCTACTCAGGTTGGTTCGATTGCTGCTGGTGGACGTTATGACAATCTAATAGGGATGTTT
GGCACACGGCAGGTTCCTGCTGTTGGGATTAGTCTGGGAATCGAGAGAGTATTTGCAATC
ATGGAACAGGTTCAGAAAGACAAGAATCAGGAAATCCGAGCCACTGAAACTCAAGTTCTC
GTTAGCATTCTTGGTGATGACAGTGCTTTAGCTGCTGAGTTGGTTGGTGAATTGTGGAAT
GCTAAAGTGAAAGCAGAATTCATGATACATAAAAAAGTGATGAAGCATATTGATCGGGCC
AGAGATTCGAGGATCCCTTGGATGGTACTTGTTGGTGAACGTGAACTTAGCGAAGGAGTT
GTAAAATTGAAGGATGTTGTTGCAGCTATTGACTATGAAGTCCCCAGAGGTAACCTTGTG
AACGACTTATGCAGACGATTAGACATGTAA

Peptide Sequence

PEP ID

XP_016512832.1
PEP Infomation

PREDICTED: histidine--tRNA ligase, cytoplasmic-like, partial [Nicotiana tabacum]
Sequence

IGEYEVKLNHRKLLDGMLAICGVPQEKFRTICSSIDKLDKQSFEQIKKEMVDEKGLSDEI
SDRIGTFVKWRGPPVELLSKLKQERSFLENNESSLALDELDIMFKALERSRCIDRVVFDL
SLARGLDYYTGVIFEAVFKGATQVGSIAAGGRYDNLIGMFGTRQVPAVGISLGIERVFAI
MEQVQKDKNQEIRATETQVLVSILGDDSALAAELVGELWNAKVKAEFMIHKKVMKHIDRA
RDSRIPWMVLVGERELSEGVVKLKDVVAAIDYEVPRGNLVNDLCRRLDM

Transcript Sequence

Gene sequence data has not been registered.